Gabriel Ciobanu

Gheorghe Păun

Mario J. Pérez-Jiménez

Membrane computing is a branch of natural computing which investigates computing models abstracted from the structure and functioning of living cells and from their interactions in tissues or higher-order biological structures. The models considered, called membrane systems (P systems), are parallel, distributed computing models, processing multisets of symbols in cell-like compartmental architectures. In many applications membrane systems have considerable advantages – among these are their inherently discrete nature, parallelism, transparency, scalability and nondeterminism. In dedicated chapters, leading experts explain most of the applications of membrane computing reported so far, in biology, computer science, computer graphics and linguistics. The book also contains detailed reviews of the software tools used to simulate P systems.

Applications of Membrane Computing

Marian Gheorghe

Pierluigi Frisco

Membrane Computing was introduced as a computational paradigm in Natural Computing. The models introduced, called Membrane (or P) Systems, provide a coherent platform to describe and study living cells as computational systems. Membrane Systems have been investigated for their computational aspects and employed to model problems in other fields, like: Computer Science, Linguistics, Biology, Economy, Computer Graphics, Robotics, etc. Their inherent parallelism, heterogeneity and intrinsic versatility allow them to model a broad range of processes and phenomena, being also an efficient means to solve and analyze problems in a novel way. Membrane Computing has been used to model biological systems, becoming with time a thorough modeling paradigm comparable, in its modeling and predicting capabilities, to more established models in this area. This book is the result of the need to collect, in an organic way, different facets of this paradigm. The chapters of this book, together with the web pages accompanying them, present different applications of Membrane Systems to Biology. Deterministic, non-deterministic and stochastic systems paired with different algorithms and methodologies show the full potential of this framework. The book is addressed to researchers interested in applications of discrete biological models and the interplay between Membrane Systems and other approaches to analyze complex systems.

Applications of Membrane Computing in Systems and Synthetic Biology

Linqiang Pan

Gheorghe Paun

Tao Song

This book constitutes the proceedings of the 9th International Conference on Bio-inspired Computing: Theories and Applications, BIC-TA 2014, held in Wuhan, China, in October 2014. The 109 revised full papers presented were carefully reviewed and selected from 204 submissions. The papers focus on four main topics, namely evolutionary computing, neural computing, DNA computing, and membrane computing.

9th International Conference, BIC-TA 2014, Wuhan, China, October 16-19, 2014, Proceedings

Bio-inspired Computing: Theories and Applications

Mario J. Pérez-Jiménez

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