Yi-Ping Phoebe Chen

Introductio to bioinformatics. Overview of structural bioinformatics. Database warehousing in bioinformatics. Modeling for bioinformatics. Pattern matching for motifs. Visualization and fractal analysis of biological sequences. Microarray data analysis.

Bioinformatics Technologies

Geert-Jan Houben

Sven Hartmann

Camille Salinesi

Flavius Frasincar

Carson Woo

Andreas L. Opdahl

Christophe Claramunt

Il-Yeol Song

Mario Piattini

Fernando Ferri

Colette Rolland

Fabio Grandi

Patrizia Grifoni

Maria Chiara Caschera

Philippe Thiran

This book constitutes the refereed joint proceedings of seven international workshops held in conjunction with the 27th International Conference on Conceptual Modeling, ER 2008, in Barcelona, Spain, in October 2008. The 42 revised full papers presented were carefully reviewed and selected from 108 submissions. Topics addressed by the workshops are conceptual modeling for life sciences applications (CMLSA 2008), evolution and change in data management (ECDM 2008), foundations and practices of UML (FP-UML 2008), modeling mobile applications and services (M2AS 2008), requirements, intentions and goals in conceptual modeling (RIGiM 2008), semantic and conceptual issues in geographic information systems (SeCoGIS 2008), and Web information systems modeling (WISM 2008).

ER 2008 Workshops CMLSA, ECDM, FP-UML, M2AS, RIGiM, SeCoGIS, WISM, Barcelona, Spain, October 20-23, 2008, Proceedings

Advances in Conceptual Modeling - Challenges and Opportunities

Chen Qingfeng

Wei Lan

Wilson Wen Bin Goh

Graph Embedding Methods for Multiple-Omics Data Analysis

Lei Zhang

Zili Zhang

Susanne Boll

Qi Tian

The 16th international conference on Multimedia Modeling (MMM2010) was held in the famous mountain city Chongqing, China, January 6–8, 2010, and hosted by Southwest University. MMM is a leading international conference for researchersand industry practitioners to share their new ideas, original research results and practicaldevelopment experiences from all multimedia related areas. MMM2010attractedmorethan160regular,specialsession,anddemosession submissions from 21 countries/regions around the world. All submitted papers were reviewed by at least two PC members or external reviewers, and most of them were reviewed by three reviewers. The review process was very selective. From the total of 133 submissions to the main track, 43 (32. 3%) were accepted as regular papers, 22 (16. 5%) as short papers. In all, 15 papers were received for three special sessions, which is by invitation only, and 14 submissions were received for a demo session, with 9 being selected. Authors of accepted papers come from 16 countries/regions. This volume of the proceedings contains the abstracts of three invited talks and all the regular, short, special session and demo papers. The regular papers were categorized into nine sections: 3D mod- ing;advancedvideocodingandadaptation;face,gestureandapplications;image processing;imageretrieval;learningsemanticconcepts;mediaanalysisandm- eling; semantic video concepts; and tracking and motion analysis. Three special sessions were video analysis and event recognition, cross-X multimedia mining in large scale, and mobile computing and applications. The technical programfeatured three invited talks, paralleloral presentation of all the accepted regular and special session papers, and poster sessions for short and demo papers.

16th International Multimedia Modeling Conference, MMM 2010, Chongqing, China, January 6-8, 2010. Proceedings

Advances in Multimedia Modeling

Limsoon Wong

High-throughput sequencing and functional genomics technologies have given us a draft human genome sequence and have enabled large-scale genotyping and gene expression profiling of human populations. Databases containing large number of sequences, polymorphisms, and gene expression profiles of normal and diseased tissues in different clinical states are rapidly being generated for human and model organisms. Bioinformatics is thus rapidly growing in importance in the annotation of genomic sequences, in the understanding of the interplay between genes and proteins, in the analysis the genetic variability of species, etc. The 3rd APBC brings together researchers, professionals, and industrial practitioners for interaction and exchange of knowledge and ideas. The proceedings contains the latest results that address conceptual and practical issues of bioinformatics. Papers presented at APBC'05 and included in this proceedings volume span the following: Novel Applications in Bioinformatics, Computational Analysis of Biological Data, Data Mining & Statistical Modeling of Biological Data, Modeling and Simulation of Biological Processes, Visualization of Biological Processes and Data, Management, Migration, and Integration of Biological Databases, Access, Indexing, and Search in Biological Databases. Contents:A Better Gap Penalty for Pairwise-SVM (H N Chua & W-K Sung)A Graph Database with Visual Queries for Genomics (G Butler et al.)Consensus Fold Recognition by Predicted Model Quality (J Xu et al.)Toward Discovering Disease-Specific Gene Networks from Online Literature (Z Zhang et al.)Hybrid Registration for Two-Dimensional Gel Protein Images (X Wang & D D Feng)Exact Algorithms for Motif Search (S Rajasekaran et al.)Voting Algorithms for Discovering Long Motifs (F Y L Chin & H C M Leung)A Highly Scalable Algorithm for the Extraction of Cis-Regulatory Regions (A M Carvalho et al.)A Support Vector Machine Approach for Prediction of T Cell Epitopes (L Huang & Y Dai)Protein Informations Towards Integration of Data Grid and Computing Grid (H Nakamura)Computing the Assignment of Orthologous Genes via Genome Rearrangement (X Chen et al.)and other papers Readership: Computational biologists, bioinformaticists, computer scientists, biologists. Keywords:Bioinformatics;Computational Biology;Datamining;Biological Data;Modeling;Visualization;Database Management;Database Integration;Biological Database Indexing;Biological Database Search

Proceedings of the 3rd Asia-Pacific Bioinformatics Conference

Yi-Ping Phoebe Chen

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